Clustering and Class Discovery

protocols

Find the innate structure of gene expression data by clustering genes and/or samples.

Click the desired algorithm

References

Brunet, J-P., Tamayo, P., Golub, T.R., and Mesirov, J.P. 2004. Metagenes and molecular pattern discovery using matrix factorization. Proc. Natl. Acad. Sci. USA 101(12):41644169.

Eisen, M.B., Spellman, P.T., Brown, P.O., and Botstein, D. 1998. Cluster Analysis and Display of Genome-Wide Expression Patterns. Proc. Natl. Acad. Sci. USA 95:14863-14868.

MacQueen, J. B. 1967. Some Methods for classification and Analysis of Multivariate Observations. In Proceedings of Fifth Berkeley Symposium on Mathematical Statistics and Probability, Vol. 1. University of California Press, California. pp. 281-297.